BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004F10SP1|AL425278
(939 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1694 1523 0.0
>3x_Contig1694
Length = 18020
Score = 1523 bits (734), Expect = 0.0
Identities = 853/926 (92%), Gaps = 6/926 (0%)
Strand = Plus / Plus
Query: 16 taaacatatggatatggggaaatgagttttttctggtgactccctaggtacgtatgttga 75
||||||||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||
Sbjct: 15355 taaacatatggatatggggaaatgagttttttctg-taactccctag-tacgtat-ttga 15411
Query: 76 tcctattaaatctcgccttgtccgamttctctctaaatgcggcgtggcagcgtacttttt 135
||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||
Sbjct: 15412 tcctattaaatctcgccttgtccgaattctctctaaatgcgac-tggcagcgtacttttt 15470
Query: 136 tcaaacaargctaatgattagagccmccgtaagtcgaatrgggttgatcaatgtggaacg 195
|||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 15471 tcaaacaaagctaatgattagagccaccgtaagtcgaatagggttgatcaatgtggaacg 15530
Query: 196 cyagcytgtatatytvtmtcmmasamgasrcatgrctgayttcmatgttatammamcttt 255
| ||| ||||||| | | || | | || |||| |||| ||| |||||||| | ||||
Sbjct: 15531 ctagcttgtatatttatatcaaagaagagacatgactgatttcaatgttataaaaacttt 15590
Query: 256 gaagcytccyttcyagagamacctctgcytgacatgttcvggctgaaagamaaaatggaa 315
||||| ||| ||| ||||| |||||||| |||||||||| |||||||||| |||||||||
Sbjct: 15591 gaagcttcctttctagagaaacctctgcttgacatgttcaggctgaaagaaaaaatggaa 15650
Query: 316 tttgayagamgcyacgatgaaatgccgayagtgcgggkmacgcgttatgcgaagagracc 375
||||| ||| || ||||||||||||||| |||||||| ||||||||||||||||| |||
Sbjct: 15651 tttgatagaagctacgatgaaatgccgatagtgcgggtaacgcgttatgcgaagagaacc 15710
Query: 376 cgaagctttaasagaaaaatcgvtcacstsattstyagamaacacgtgactyactattat 435
||||||||||| |||||||||| |||| | ||| | ||| ||||||||||| ||||||||
Sbjct: 15711 cgaagctttaagagaaaaatcgatcacgtgattgttagaaaacacgtgacttactattat 15770
Query: 436 ygtcaaccgtcctgtcggtgtattcaagatgggattatgtggagagggaattgacacttg 495
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 15771 tgtcaaccgtcctgtcggtgtattcaagatgggattatgtggagaaggaattgacacttg 15830
Query: 496 ccagcmgcccacgacagayatsvmtcctttctaavamsatatkggmatgkcacattacct 555
| ||| |||||||||||| || |||||||||| | |||| || ||| ||||||||||
Sbjct: 15831 caagcagcccacgacagatataaatcctttctaaaaagatattggaatgtcacattacct 15890
Query: 556 cggttcaccgcmatgcgcgcyttgatgctcaamatattttcaragttttgcagcctcctc 615
||||||||||| |||||||| ||||||||||| ||||||||| |||||||||||||||||
Sbjct: 15891 cggttcaccgcaatgcgcgctttgatgctcaaaatattttcaaagttttgcagcctcctc 15950
Query: 616 atccttcaagacggacttccatcttgttcggatttgataatgtcatctgcatgcaaatga 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15951 atccttcaagacggacttccatcttgttcggatttgataatgtcatctgcatgcaaatga 16010
Query: 676 gatcgcgaaatgtatagaaaggctgatgataaatgaattgcgtcgtatgattgatataat 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16011 gatcgcgaaatgtatagaaaggctgatgataaatgaattgcgtcgtatgattgatataat 16070
Query: 736 tatcataccctctgaaacttgtcatcaattcaccagggtggaatgaactgatctactatt 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16071 tatcataccctctgaaacttgtcatcaattcaccagggtggaatgaactgatctactatt 16130
Query: 796 gttggaagagagagacagtgatgatctgkcgrggagcttttttcgatctaatttkaacct 855
|||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||
Sbjct: 16131 gttggaagagagagacagtgatgatctgtcgaggagcttttttcgatctaattttaacct 16190
Query: 856 cagcggaacaatggggcgagtaatggctggtg-aaaagcaagactacttagcaccaataa 914
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 16191 cagcggaacaatggggcgagtaatggctggtgaaaaagcaagactacttagcaccaataa 16250
Query: 915 actcagaaacc-tccytgtggttctt 939
||||||||||| ||| ||||||||||
Sbjct: 16251 actcagaaaccttccttgtggttctt 16276
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.720 1.36
Gapped
Lambda K H
1.44 0.720 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3399
Number of Sequences: 1807
Number of extensions: 3399
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 939
length of database: 10,358,551
effective HSP length: 16
effective length of query: 923
effective length of database: 10,329,639
effective search space: 9534256797
effective search space used: 9534256797
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.1 bits)
S1: 11 (23.3 bits)
S2: 48 (100.1 bits)